RESEARCH INTERESTS
ecology
evolution
adaptation
speciation
genome evolution
SUMMARY C.V.
September 2024
Dr. Patrik Nosil
Citizenship: Canada
Birthdate: July 5, 1975
Current Position:
Director / Diriger of Research
Centre National de la Recherche Scientifique (CNRS)
SETE Moulis, France
Email: patrik.nosil@sete.cnrs.fr, patrik.nosil@cefe.cnrs.fr
Education
1999. B.Sc. Biology. University of Victoria, Canada.
2001-2006. Ph.D. Biology. Simon Fraser University, Canada (advisor Dr. Bernard Crespi).
Academic Positions
2006-2008. Postdoctoral fellow, University of British Columbia, Canada (advisor Dr. Dolph Schluter).
2008-2009. Fellow, Wissenschaftskolleg, Institute for Advanced Study, Berlin, Germany
2009-2011. Assistant Professor, University of Colorado, Boulder, USA
2012-2017. Independent Research Fellow, University of Sheffield, UK
2017-2022. Visiting Scientist (Sabbatical Fellow), Utah State University, USA
2019-2021. European Research Council funded Researcher, CRNS
2021-2023. Director / Diriger of Research, Center for Evolution and Functional Ecology (CEFE), Centre National de al Recherche Scientifique (CNRS)
2023-present. Director / Diriger of Research, SETE Moulis, Centre National de la Recherche Scientifique (CNRS)
Academic Awards Received
Natural Sciences and Engineering Research Council Postgraduate Scholarship A (2000-2002)
Natural Sciences and Engineering Research Council Postgraduate Scholarship B (2002-2004)
SFU Research matters entrance scholarship (awarded 2000)
Entomological Society of Canada Postgraduate Scholarship (awarded 2002)
Isabelle Steel Memorial Scholarship (awarded 2004)
SFU Graduate Fellowship (awarded 2005)
SFU President's Stipend (awarded 2006)
American Society of Naturalists Young Investigators Prize (awarded 2006)
Natural Sciences and Engineering Research Council Post-Doctoral Fellowship (2006-2008)
Natural Sciences and Engineering Research Council Doctoral Prize (2007) (awarded by NSERC to the top two theses in the natural sciences within a given year)
Governor General of Canada Gold Medal (2007)
Canadian Association for Graduate Students UMI Prize (2007) (awarded for best science/engineering thesis in Canada)
Dobzhansky Prize (2008) (awarded annually by the Society for the Study of Evolution to one young evolutionary biologist)
Zoological Society of London Scientific Medal (2015) (awarded annually to a mid-career scientist who has made strong contributions to Zoology)
Grant Support
Entomological Society of Canada Postgraduate Travel Award (awarded 2003) - $2000
NSERC graduate travel award (awarded 2004) - $2000
Isabelle Steel Memorial research award (awarded 2004) - $1000
NSF 3-year research grant (awarded 2007 – co-written with Dr. Dan Funk) – $450,000
NSF NESCent working group grant, collaborator (awarded 2009, PI’s Rebecca Safran and Albert Uy)
CU Undergraduate Research Opportunity Program team grant (awarded 2009) - $2400
CU Innovation Seed Grant – Genomics and speciation (awarded 2010) - $50,000
European Research Council Starter Grant (2011-2016); Genomics of speciation in stick insects – £1,547,417
Unity through Knowledge Research Grant (2013-2015); Rapid evolution of mussel populations - £153,144
University Research Fellowship, Royal Society of London (2014-2019); Genome evolution from pattern to process – £435,000
Natural Environmental Research Council Grant (2014-2017); Proximal and ultimate causes of adaptive lateral gene transfers in land plants - £589,800
Royal Society of London, Research Grant (2015-2018); Genetic and epigenetic mechanisms for the colonization of new environments - £121,617.
European Research Council Consolidator Grant (2018-2023); Dynamics of eco-evolutionary systems – €1,990,734
ANR TULIP Senior Package (2023-2025); Dynamics of complex systems in the biological sciences and beyond - €550,000
Publication summary
I have published 147 peer-reviewed publications, one book, and several other book chapter articles. The peer-reviewed publications are found in top interdisciplinary journals such as Nature, Science (x7), PNAS (x5), Nature Communications, Science Advances (x2), and Current Biology (x5), and in the top journals in my field such as Nature Ecology and Evolution (x5), Ecology Letters (x3), Proceedings B (x6), and Evolution (x24). This work has been widely recognized and cited (e.g., H-index on Google Scholar = 64, number of citations >21,000, with >9000 since 2017). Details are found below. My book on how new species form, published by Oxford University Press, has also been well-cited (>1600 times).
Books and Edited Volumes
Nosil, P. 2012. Ecological speciation. Oxford University Press, Oxford.
Nosil, P. and J.L. Feder. 2012. Genomic divergence during speciation. Philosophical Transactions of the Royal Society of London B (theme issue).
Nosil, P. and J.L. Feder. 2013. Genome evolution and speciation. Evolution (special section).
Articles in Peer-Reviewed Journals
Under consideration
149) Carvalho, C.F. de, N.P. Planidin, R. Villoutreix, V. Soria-Carrasco, R. Riesch, J.L. Feder, J. Slate, P. Nosil, and Z. Gompert. Linking DNA methylation to genetic differentiation in Timema cristinae stick insects. submitted.
148) Hood, G, Z. Gompert, L. Zhang, M. Comerford, J. Drummond, P.B-D. Pinto, A. Driscoe, E. Martinson, C.R. Linnen, E. Bendall, V.C. Sousa, R. Bagley, P. Nosil, J.L. Feder, J.R. Ott, and S.P. Egan. Natural selection promotes extraordinary, but predictable, genome-wide divergence in a haplodiploid. submitted.
147) Carvalho, C.F. de, N.P. Planidin, R. Villoutreix, V. Soria- Carrasco, R. Riesch, J.L. Feder, T.L. Parchman, J. Slate, Z. Gompert, and P. Nosil. Ecology not genetics explains correlated trait divergence during speciation. submitted.
146) Planidin, N.P., C.F. de Carvalho, J.L. Feder, Z. Gompert, J.D. House, and P. Nosil. Adaptive epigenetic divergence can facilitate ecological speciation. submitted.
145) Gompert, Z., J.L. Feder, T.L. Parchman, N.P. Planidin, F.J.H. Whiting, and P. Nosil. Adaptation repeatedly uses complex structural genomic variation. submitted.
2025
2024
144) Schield, D.R., J.K. Carter, E.S.C. Scordato, I.I. Levin, S.A. Mueller, Z. Gompert, P. Nosil, J.B.W. Wolf, and R.J. Safran. 2024. Sexual selection promotes reproductive isolation in barn swallows. Science 386(6727):eadj8766.
143) Nosil, P. 2024. Predicting and anticipating rapid evolution. Science 386: 376-377.
142) Nosil, P., C.F. de Carvalho, R. Villoutreix, L.S. Zamorano, M. Sinclair-Waters, N. Planidin, T. Parchman, J.l. Feder, and Z. Gompert. Evolution repeats itself in replicate long-term studies in the wild. Science Advances 10: eadl3149.
141) Nosil, P., Z. Gompert, and D.J. Funk. 2024. Dynamics of sexual and habitat isolation at the transition between stick insect populations and species. Nature Communications 15: 2273.
140) Sinclair-Waters, M., L.S. Zamorano, Z. Gompert, T. Parchman, Hopkins, D.P., Tyukmaeva, V, and P. Nosil. Genetic variation within a stick insect species associated with community-level traits. Journal of Evolutionary Biology 37: 642–652.
2023
139) Carvalho, C.F. de, J. Slate, R. Villoutreix, V. Soria-Carrasco, Rüdiger Riesch, J.L. Feder, Z. Gompert, and P. Nosil. 2023. DNA methylation differences between stick-insect ecotypes. Molecular Ecology 32: 6809-6823.
138) Zamorano, L.S., Z. Gompert, E.A. Fronhofer, J.L. Feder, and P. Nosil. 2023. A stabilizing eco-evolutionary feedback loop in the wild. Current Biology 33: 1-7.
137) Nosil, P., V. Soria-Corrasco, R. Villoutreix, M. De la Mora Curiel, C.F. de Carvalho, T. Parchman, J.L. Feder, and Z. Gompert. 2023. Complex evolutionary processes maintain an ancient chromosomal inversion. Proceedings of the National Academy of Sciences USA 120: e2300673120.
136) Villoutreix, R. C.F. de Carvalho, J.L. Feder, Z. Gompert, and P. Nosil. 2023. Disruptive selection and the evolution of discrete color morphs in Timema stick insects. Science Advances 9: eabm8157.
135) Sinitambirivoutin, M., P. Nosil, S.M. Flaxman, J.L. Feder, Z. Gompert, and V. Dakos. 2023. Early-warning signals of impending speciation. Evolution 77: 1444–1457.
134) Bolnick, D.I., A.K. Hund, P. Nosil, F. Peng, M. Ravinet, S. Stankowski, S. Subramanian, J. Wolf, and R. Yukilevich. 2023. A multivariate view of the speciation continuum. Evolution 77: 318–328.
133) Feder, J.L., and P. Nosil. 2023. Beyond dichotomies in species and speciation. National Science Review Volume 9, nwad018, https://doi.org/10.1093/nsr/nwad018.
2022
132) Chaturvedi, S., Z. Gompert, J.L. Feder, O.G. Osborne, M. Muschick, R. Riesch, V. Soria-Carrasco, and P. Nosil. 2022. Climatic similarity and genomic background shape the extent of parallel adaptation in Timema stick insects. Nature Ecology and Evolution 6: 1952–1964.
131) Nosil, P., and Gompert, Z. 2022. Eco-evolutionary effects of keystone genes. Science 376: 30-31.
130) Gompert Z., S.M. Flaxman, J.L. Feder, L-M. Chevin, and P. Nosil. 2022. Laplace’s demon in biology: models of evolutionary prediction. Evolution 76: 2794–2810.
129) Gompert, Z., J.L. Feder, and P. Nosil. 2022. The short-term, genome-wide effects of indirect selection deserve study: a response to Charlesworth and Jensen (2022). Molecular Ecology 31: 4444-4450.
128) Planidin, N.P., C.F. de Carvalho, J. Feder, Z. Gompert, and P. Nosil. 2022. Epigenetics and reproductive isolation: a commentary on Westram et al., 2022. Journal of Evolutionary Biology 35:1188–1194
.
127) Chevin, L-M., Z. Gompert, and P. Nosil. 2022. Frequency dependence and the predictability of evolution in a changing environment. Evolution Letters 6: 21–33.
126) Villoutreix, R., C.F. de Carvalho, Z. Gompert, T.L. Parchman, J.L. Feder, and P. Nosil. 2022. Testing for fitness epistasis in a transplant experiment identifies a candidate adaptive locus in Timema stick insects. Philosophical Transactions of the Royal Society of London B 377: 20200508.
125) Gompert, Z., J.L. Feder, and P. Nosil. 2022. Natural selection drives genome-wide evolution via chance genetic associations. Molecular Ecology 31: 467–481.
124) Calvert Mc-B., M.M. Doellman, J.L. Feder, G.R. Hood, P. Meyers, S.P. Egan, T.H.Q. Powell, M.M. Glover, C. Tait, H. Schuler, S.H. Berlocher, J.J. Smith, P. Nosil, D.A. Hahn, and G.J. Ragland. 2022. Genomically correlated trait combinations and antagonistic selection contributing to counterintuitive genetic patterns of adaptive diapause divergence in Rhagoletis flies. Journal of Evolutionary Biology 35: 146–163.
123) Bruzzese D.J., H. Schuler, T.M. Wolfe, M.M. Glover, J. Mastroni, M.M. Doellman, C. Tait, W.L. Yee, J. Rull, M. Aluja, G.R. Hood, R. Goughnour, C. Stauffer, P. Nosil, and J.L. Feder. 2022. Testing the potential contribution of Wolbachia to speciation when cytoplasmic incompatibility becomes associated with host-related reproductive isolation. Molecular Ecology 31: 2935–2950.
2021
122) Nosil, P., J. Feder, and Z. Gompert. 2021. How many genetic changes create new species? Science 371: 777-779.
121) Nosil, P., J.L. Feder, and Z. Gompert. 2021. Biodiversity, resilience and the stability of evolutionary systems. Current Biology 31: R1149-R1153.
120) Villoutreix, R., D. Ayala, M. Joron, Z. Gompert, J.L. Feder, and P. Nosil. 2021. Inversion breakpoints and the evolution of supergenes. Molecular Ecology 30: 2738-2755.
119) Olofsson, J.K., E.V. Curran , F. Nyirenda, M.E. Bianconi, L.T. Dunning, V. Milenkovic, G. Sotelo, O. Hidago, R.F. Powell, M.R. Lundgren, I.J. Leitch, P. Nosil, C.P. Osborne, P-A. Christin. 2021. Low dispersal and ploidy differences in a grass maintain photosynthetic diversity despite gene flow and habitat overlap. Molecular Ecology 30:2116–2130.
2020
118) Villoutreix, R., C.F. de Carvalho, V. Soria-Carrasco, D. Lindtke, M. De-la-Mora, M. Muschick, J.L. Feder, T.L. Parchman, Z. Gompert, and P. Nosil. 2020. Large-scale mutation in the evolution of a gene complex for cryptic coloration. Science 369: 460-466.
117) Nosil, P., R. Villoutreix, C.F. de Carvalho, J.L. Feder, T.L. Parchman, and Z. Gompert. 2020. Ecology shapes epistasis in a genotype-phenotype-fitness map for stick insect colour. Nature Ecology and Evolution 4: 1673–1684.
116) Nosil, P., S.M. Flaxman, J.L. Feder, and Z. Gompert. 2020. Increasing our ability to predict contemporary evolution. Nature Communications 11: 5592.
115) Tyukmaeva V.I., D.P. Hopkins, Z. Gompert, J.L. Feder, and P. Nosil. 2020. Functional genomics offers new tests of speciation hypotheses. Trends in Ecology and Evolution 35: 968-971.
114) Muschick, M., V. Soria-Carrasco, J.L. Feder, Z. Gompert, and P. Nosil. Adaptive zones shape the magnitude of premating reproductive isolation in Timema stick insects. 2020. Philosophical Transactions of the Royal Society of London B 375: 0190541.
113) Meyers, P.J., M.M. Doellman, G.J. Ragland, G.R. Hood, S.P. Egan, T.H.Q. Powell, P. Nosil, and J.L. Feder. 2020. Can the genomics of ecological speciation be predicted across the divergence continuum from host races to species? A case study in Rhagoletis. Philosophical Transactions of the Royal Society of London B 375: 20190534.
112) Montejo Kovacevich, G, T.E. Farkas, A. Beckerman, and P. Nosil. 2020. Exploring context-dependency in eco-evolutionary patterns with the stick insect Timema cristinae. Ecology and Evolution 10: 8197–8209.
2019
111) Olofsson, J.K., L.T. Dunning, M.R. Lundgren, H.J. Barton, J. Thompson, N. Cuff, M. Ariyarathne, D. Yakandawala, G. Sotelo, K. Zeng, C.P. Osborne, P. Nosil, P-A. Christin. 2019. Population-specific selection on standing variation generated by lateral gene transfers in a grass. Current Biology 29: 3921-3927.
110) Dunning, L.T., J.J. Moreno-Villena, J.K. Olofsson, Y. Yang, C. Parisod, J. Dionora, R. R. Choudhury, W.P. Quick, M. Park, J.L. Bennetzen, G. Besnard, P. Nosil, C.P. Osborne, and P-A. Christin. 2019. Lateral transfers of large DNA fragments spread functional genes among grasses. Proceedings of the National Academy of Sciences USA 116: 4416-4425.
109) Grbin, D., I. Sabolić, G. Klobučar, S. R. Dennis, M. Šrut, R. Bakarić, V. Baković, S. Radić Brkanac, P. Nosil and A. Štambuk. 2019. Biomarker response of Mediterranean mussels regarding environmental conditions, pollution impact and seasonal effects. Science of the Total Environment. 694: 133470.
108) Lucek, K., Gompert, Z., and P. Nosil. 2019. The role of structural genomic variants in population differentiation and ecotype formation in Timema cristinae walking sticks. Molecular Ecology 28: 1224-1237.
107) Dakos, V., B. Matthews, A.P. Hendry, J. Levine, N. Loeuille, J. Norberg, P. Nosil, M. Scheffer, and L. De Meester. 2019. Ecosystem tipping points in an evolving world. Nature Ecology and Evolution https://doi.org/10.1038/s41559-019-0797-2.
106) Doellman, M.M., S.P. Egan, G.J. Ragland, P.J. Meyers, G.R. Hood, T.H.Q. Powell, P. Lazorchak, D.A. Hahn, S.H. Berlocher, P. Nosil, and J.L. Feder. 2019. Standing geographic variation in eclosion time and the genomics of host race formation in Rhagoletis pomonella fruit flies. Ecology and Evolution 9: 393–409.
105) Nosil, P., V. Soria-Carrasco, J.L. Feder, S.M. Flaxman, and Z. Gompert. 2019. Local and system-wide adaptation is influenced by population connectivity. Conservation Genetics 20: 454-57.
2018
104) Skovmand, L.H., C.C. Xu, M. Servedio, P. Nosil, R. Barrett, and A.P. Hendry. 2018. Keystone genes. Trends in Ecology and Evolution 33: 689-700.
103) Nosil, P., R. Villoutreix, C.F. de Carvalho, T.E. Farkas, V. Soria-Carrasco, J.L. Feder, B.J. Crespi, and Z. Gompert. 2018. Natural selection and the predictability of evolution in Timema stick insects. Science 359: 765-770.
102) Schilling, M.P., S.P. Mullen, M. Kronforst, R.J. Safran, P. Nosil, J.L. Feder, Z. Gompert, and S.M. Flaxman. 2018. Transitions from single- to multi-locus processes
during speciation. Genes 9: 274.
101) Doellman, M.M., G.J. Ragland, G.R. Hood, P.J. Meyers, S.P. Egan, T.H.Q. Powell, P. Lazorchak, M.M. Glover, C. Tait, H. Schuler, D.A. Hahn, S.H. Berlocher, J.J. Smith, P. Nosil, and J.L. Feder. 2018. Genomic differentiation during speciation-with-gene-flow: comparing geographic and host-related variation in divergent life history adaptation in Rhagoletis pomonella. Genes 9: 262.
2017
100) Rüdiger R.*, M. Muschick*, D. Lindtke*, R. Villoutreix*, A.A. Comeault, T.E. Farkas, K. Lucek, E. Hellen, V. Soria-Carrasco, S.R. Dennis, C.F. de Carvalho, R.J. Safran, C.P. Sandoval, J.L. Feder, R. Gries, B.J. Crespi, G. Gries, Z. Gompert*, and P. Nosil. 2017. Transitions between phases of genomic differentiation during stick-insect speciation. Nature Ecology and Evolution 1: 0082.
99) Lindtke, D., K. Lucek, V. Soria-Carrasco, R. Villoutreix, T.E. Farkas, R. Riesch, S.R. Dennis, Z. Gompert, and P. Nosil. 2017. Long-term balancing selection on chromosomal variants associated with crypsis in a stick insect. Molecular Ecology 26: 6189-6205.
98) Feder, J.L., P. Nosil, Z. Gompert, S.M. Flaxman, and M.P. Schilling. 2017. Barnacles, barrier loci, and the systematic building of species. Journal of Evolutionary Biology 30: 1494-1497.
97) Ragland, G., P. Meyers, M. Doellman, G. Hood, S. Egan, T. Powell, D. Hahn, P. Nosil, and J.L. Feder. 2017. A test of genomic modularity among life history adaptations promoting speciation-with-gene-flow. Molecular Ecology 26: 3926-3942.
96) Dunning, L.T., M.R. Lundgren, J.J. Moreno Villena, M. Namaganda, E.J. Edwards, P. Nosil, C.P. Osborne, and P-A. Christin. 2017. Introgression and repeated co-option facilitated the recurrent emergence of C4 photosynthesis among close relatives. Evolution 71: 1541-1555.
95) Nosil, P., J. Feder, S.M. Flaxman, and Z. Gompert. 2017. Tipping points in the dynamics of speciation. Nature Ecology and Evolution 1: 0001.
94) Gompert, Z., S.P. Egan, R. Barrett, Jeffrey L. Feder, and P. Nosil. 2017. Multi-locus approaches for the measurement of selection on correlated genetic loci. Molecular Ecology 26: 365–382.
2016
93) Comeault, A.A., C.F. de Carvalho, S. Dennis, V. Soria-Carrasco, and P. Nosil. 2016. Color phenotypes are under similar genetic control in two distantly related species of Timema stick insect. Evolution 70: 1283-1296.
92) Farkas, T.E., T. Mononen, A.A. Comeault, and P. Nosil. 2016. Observational evidence that maladaptive gene flow reduces patch occupancy in a wild insect metapopulation. Evolution 70: 2879-2888.
91) Olofsson, J., M. Bianconi, G. Besnard, L. Dunning, M. Lundgren, H. Holota, M. Vorontsova, P. Nosil, C. Osborne, and P-A. Christin. 2016. Genome biogeography reveals the intraspecific spread of adaptive mutations for a complex trait. Molecular Ecology 25: 6107–6123.
90) Safran R.J., E.S.C. Scordato, M.R. Wilkins, J.K. Hubbard, B.R. Jenkins, T. Albrecht, S.M. Flaxman, H. Karaardıç, Y. Vortman, A. Lotem, P. Nosil, P. Pap, S. Shen, S.-F. Chan, T. Parchman, and N.C. Kane. 2016. Genome-wide differentiation in closely related populations: the roles of selection and geographic isolation. Molecular Ecology 25: 3865-3883.
89) Riesch, R., M. Tobler, H. Lerp, J. Jourdan, T. Doumas, P. Nosil, R.B. Langerhans, and M. Plath. 2016. Extremophile Poeciliidae: multivariate insights into the complexity of speciation along replicated ecological gradients. BMC Evolutionary Biology 16: 136.
2015
88) Comeault, A.A., S.M. Flaxman, R. Riesch, E. Curran, V. Soria-Carrasco, Z. Gompert, T.E. Farkas, M. Muschick, T.L. Parchman, T. Schwander, J. Slate, and P. Nosil. 2015. Selection on a genetic polymorphism counteracts ecological speciation in a stick insect. Current Biology 25: 1975–1981.
87) Egan, S.P., G. Ragland, L. Assour, T.H.Q. Powell, G.R. Hood, S. Emrich, P. Nosil, and J.L. Feder. 2015. Experimental evidence of genome-wide impact of ecological selection during early stages of speciation-with-gene-flow. Ecology Letters 18: 817-825.
86) Nosil, P. 2015. Evolution: sex limits adaptation. Current Biology 25: R613-R616 (Dispatch article).
85) Farkas, T.E., A. Hendry, P. Nosil, and A. Beckerman. 2015. How maladaptation can structure biodiversity: Eco-evolutionary island biogeography. Trends in Ecology and Evolution 30: 154-160.
2014
84) Soria-Carrasco, V.*, Z. Gompert*, A.A. Comeault, T.E. Farkas, T.L. Parchman, J.S. Johnson, C.A. Buerkle, J.L. Feder, J. Bast, T. Schwander, S.P. Egan, B.J. Crespi, and P. Nosil. 2014. Stick insect genomes reveal natural selection’s role in parallel speciation. Science 344: 738-742.
83) Flaxman, S.M., A. Wacholder, J.L. Feder, and P. Nosil. 2014. Theoretical models of the influence of genomic architecture on the dynamics of speciation. Molecular Ecology 23: 4074-4088.
82) Gompert, Z., A.A. Comeault, T.E. Farkas, J.L. Feder, T.L. Parchman, C.A. Buerkle, and P. Nosil. 2014. Experimental evidence for ecological selection on genome variation in the wild. Ecology Letters 17: 369-379.
81) Feder, J.L., P. Nosil, and S.M. Flaxman. 2014. Assessing when chromosomal rearrangements affect the dynamics of speciation: implications from computer simulations. Frontiers in Genetics 5: 295.
80) Muschick, M., P. Nosil, M. Roesti, M.T. Dittmann, L. Harmon, and W. Salzburger. 2014. Testing the stage model in the adaptive radiation of cichlid fishes in East African Lake Tanganyika. Proceedings of the Royal Society of London B 281: 20140605.
79) Feder, J.L., P. Nosil, A. Wacholder, S.P. Egan, S.H. Berlocher, and S.M. Flaxman. 2014. Genome wide congealing and rapid transitions across the speciation continuum during speciation with gene flow. Journal of Heredity 105: 810-820.
78) Comeault, A.A., V. Soria-Carrasco, Z. Gompert,T.E. Farkas, C.A. Buerkle, T.L. Parchman, and P. Nosil. 2014. Genome-wide association mapping of phenotypic traits subject to a range of intensities of natural selection in Timema cristinae. American Naturalist 183: 711-727.
2013
77) Feder, J.L., S. Flaxman, S.P. Egan, A.A. Comeault, and P. Nosil. 2013. Geographic mode of speciation and genomic divergence. Annual Review of Ecology Evolution and Systematics 44: 73-97.
76) Farkas, T.E., T. Mononen, A.A. Comeault, I. Hanksi, and P. Nosil. 2013. Evolution of camouflage drives rapid ecological change within an insect community. Current Biology 23: 1835-1843.
75) Flaxman, S.M., J.L. Feder, and P. Nosil. 2013. Genetic hitchhiking and the dynamic build up of genomic divergence during speciation with gene flow. Evolution 67: 2577-2591.
74) Powell, T.H.Q., G.R. Hood, M.O. Murphy, J.S. Heilveil, S.H. Berlocher, P. Nosil, and J.L. Feder. 2013. Genetic divergence along the speciation continuum: the transition from host race to species in Rhagoletis (Diptera: Tephritidae). Evolution 67: 2561-2576.
73) Nosil, P., R. Riesch, and M. Muschick. 2013. Climate affects host-plant but not mating preferences of Timema cristinae stick-insect populations. Evolutionary Ecology Research 15: 689-704.
72) Nosil, P., and J.L. Feder. 2013. Genome evolution and speciation: towards quantitative descriptions of pattern and process. Evolution 67: 2461-2467.
71) Schwander, T., D. Arbuthnott, G. Gries, R. Gries, P. Nosil, and B.J. Crespi. 2013. Mate discrimination, hydrocarbon divergence and speciation in Timema stick insects. BMC Evolutionary Biology 13: 151.
70) Roy, D., O. Seehausen, and P. Nosil. 2013. Sexual dimorphism dominates divergent host use in stick insect trophic morphology. BMC Evolutionary Biology 13:135.
69) Nosil, P. 2013. Degree of sympatry affects reinforcement in Drosophila. Evolution 67: 868-872.
68) Crespi, B.J., and P. Nosil. 2013. Conflictual speciation: species formation via intragenomic conflict. Trends in Ecology and Evolution 28: 48-57.
67) Feder, J.L., S.P. Egan, S.M. Flaxman, and P. Nosil. 2013. Hybridization and the build up of genomic divergence during speciation. Journal of Evolutionary Biology 26: 261-266.
66) Reimchen, T.E., C. Bergstrom, and P. Nosil. 2013. Natural selection and the adaptive radiation of Haida Gwaii stickleback. Evolutionary Ecology Research 15: 241-269.
65) Hendry, A.P., J. Boughman, B. Matthews, C. Peichel, and P. Nosil. 2013. Research on stickleback: the now and the next. Evolutionary Ecology Research 15: 111-141.
2012
64) Flaxman, S.M., J.L. Feder, and P. Nosil. 2012. Spatially explicit models of divergence and genome hitchhiking. Journal of Evolutionary Biology 25: 2633-2650.
63) Nosil, P., and P.A. Hohenlohe. 2012. Dimensionality of sexual isolation during reinforcement and ecological speciation in Timema cristinae stick insects. Evolutionary Ecology Research 14: 467–485.
62) Nosil, P., Z. Gompert,T. Farkas, A. Comeault, J.L. Feder, C.A. Buerkle, and T.L. Parchman. 2012. Genomic consequences of multiple speciation processes in a stick insect. Proceedings of the Royal Society of London B 279: 5058-5065.
61) Feder, J.L., S.P. Egan, and P. Nosil. 2012. The genomics of speciation-with-gene-flow. Trends in Genetics 28: 342-350.
60) Nosil, P., T.L. Parchman, J.L. Feder, and Z. Gompert. 2012. Do highly divergent loci reside in gene regions affecting reproductive isolation? A test using next-generation sequence data in Timema stick insects. BMC Evolutionary Biology 12: 164.
59) Comeault, A., M. Sommers, T. Schwander, C.A. Buerkle, T. Farkas, P. Nosil, and T. Parchman. 2012. De novo characterization of the transcriptome of Timema cristinae facilitates marker discovery and inference of genetic divergence. Molecular Ecology Resources 12: 549-61.
58) Nosil, P., and J.L. Feder. 2012. Genomic divergence: causes and consequences. Philosophical Transactions of the Royal Society of London B 367: 332-342.
57) Feder, J.L., R. Gejji, S. Yeaman, and P. Nosil. 2012. Establishment of new mutations under divergence and genome hitchhiking. Philosophical Transactions of the Royal Society of London B 367: 461-474.
56) Nosil, P., and J.L. Feder. 2012. Widespread yet heterogeneous genomic divergence. Molecular Ecology 21: 2829–2832 (News and Views).
55) Servedio, M.R., G.S. Van Doorn, M. Kopp, A.M. Frame, and P. Nosil. 2012. Magic traits, pleiotropy, and effect sizes: a response to Haller et al. Trends in Ecology and Evolution 27: 5-6.
2011
54) Funk, D.J., S.P. Egan, and P. Nosil. 2011. ‘Isolation-by-Adaptation’ in Neochlamisus leaf beetles: host-related selection promotes neutral genomic divergence. Molecular Ecology 20: 4671-4682.
53) Agrawal, A.F., J.L. Feder, and P. Nosil. 2011. Ecological divergence and the origins of intrinsic postmating isolation with gene flow. International Journal of Ecology 2011: 1-15.
52) Feder, J.L., R. Gejii, T.H.Q. Powell, and P. Nosil. 2011. Adaptive chromosomal divergence driven by mixed geographic mode of evolution. Evolution 65: 2157-2170.
51) Nosil, P., and D. Schluter. 2011. The genes underlying the process of speciation. Trends in Ecology and Evolution 26: 160-167.
50) Nosil, P., and S. Flaxman. 2011. Conditions for mutation-order speciation. Proceedings of the Royal Society of London B 278: 399-407.
49) Servedio, M.R., G.S. Van Doorn, M. Kopp, A.M. Frame, and P. Nosil. 2011. Magic traits in speciation: ‘magic’ but not rare? Trends in Ecology and Evolution 26: 389-397.
2010
48) Michel, A.P., S. Sim, T. Powell, P. Nosil, and J.L. Feder. 2010. Widespread genomic divergence during sympatric speciation. Proceedings of the National Academy of Sciences USA 107: 9724-9729.
47) Feder, J.L., and P. Nosil. 2010. The efficacy of divergence hitchhiking in generating genomic islands during ecological speciation. Evolution 64: 1729-1747.
46) Pavey, S., H. Collin, P. Nosil, and S. Rogers. 2010. The role of gene expression in ecological speciation. Year in Evolutionary Biology 1206: 110-129.
45) Matsubayashi, K.W., I. Oshima, and P. Nosil. 2010. Ecological speciation in phytophagous insects. Entomologia Experimentalis et Applicata 134: 1-27.
2009
44) Feder, J.L., and P. Nosil. 2009. Chromosomal inversions and species differences: when are genes affecting adaptive divergence and reproductive isolation expected to reside within inversions? Evolution 63: 3061-3075.
43) Mallet, J., A. Meyer, P. Nosil, and J.L. Feder. 2009. Space, sympatry, and speciation. Journal of Evolutionary Biology 22: 2332-2341.
42) Nosil, P. 2009. Adaptive population divergence in cryptic color-pattern following a reduction in gene flow. Evolution 63: 1902-1912.
41) Nosil, P., L. Harmon, and O. Seehausen. 2009. Ecological explanations for (incomplete) speciation. Trends in Ecology and Evolution 24: 145-156.
40) Nosil, P., D.J. Funk, and D. Ortiz-Barrientos. 2009. Divergent selection and heterogeneous genomic divergence. Molecular Ecology 18: 375-402.
39) Ortiz-Barrientos, D., Grealy, A., and P. Nosil. 2009.The genetics and ecology of reinforcement: implications for the evolution of prezygotic isolation in sympatry and beyond. Year in Evolutionary Biology 1168: 156-182.
2008
38) Nosil, P., S.P. Egan, and D.J. Funk. 2008. Heterogeneous genomic differentiation between walking-stick ecotypes: ‘isolation by adaptation’ and multiple roles for divergent selection. Evolution 62: 316-336.
37) Nosil, P. 2008. Speciation with gene flow may be common. Molecular Ecology 17: 2103-2106 (News and Views).
36) Nosil, P. 2008. Ernst Mayr and the integration of geographic and ecological factors in speciation. Biological Journal of the Linnean Society 95: 26-26.
35) Nosil, P., and R. Yukilevich. 2008. Mechanisms of reinforcement in simulated and natural polymorphic populations. Biological Journal of the Linnean Society 95: 305-319.
34) Nosil, P., and C.P. Sandoval. 2008. Ecological niche dimensionality and the evolutionary diversification of stick insects. PLoS ONE 3: e1907.
33) Egan, S.P., P. Nosil, and D.J. Funk. 2008. Selection and genomic differentiation during ecological speciation: isolating the contributions of host-association via a comparative genome scan of Neochlamisus bebbianae leaf beetles. Evolution 62: 1162-1181.
2007
32) Bolnick, D., and P. Nosil. 2007. Natural selection in populations subject to a migration load. Evolution 61: 2229-2243.
31) Nosil, P. 2007. Divergent host-plant adaptation and reproductive isolation between ecotypes of Timema cristinae. American Naturalist 169: 151-162.
30) Nosil, P., B.J. Crespi, R. Gries, and G. Gries. 2007. Natural selection and divergence in mate preference during speciation. Genetica 129: 309-327.
29) Hendry, A.P., P. Nosil, and L. Rieseberg. 2007. The speed of ecological speciation. Functional Ecology 21: 455-464.
2006
28) Nosil, P., and B.J. Crespi. 2006. Experimental evidence that predation promotes divergence during adaptive radiation. Proceedings of the National Academy of Sciences USA 103: 9090-9095.
27) Nosil, P., B.J. Crespi, C.P. Sandoval, and M. Kirkpatrick. 2006. Migration and the genetic covariance between habitat preference and performance. American Naturalist 167: E66-E78.
26) Nosil, P., and B.J. Crespi. 2006. Ecological divergence promotes the evolution of cryptic reproductive isolation. Proceedings of the Royal Society of London B 273: 991-997.
25) Nosil, P.,B.J. Crespi, and C.P. Sandoval. 2006. The evolution of host preference in allopatric versus parapatric populations of Timema cristinae walking-sticks. Journal of Evolutionary Biology 19: 929-942.
24) Funk, D.J., P. Nosil, and B. Etges. 2006. Ecological divergence exhibits consistently positive associations with reproductive isolation across disparate taxa. Proceedings of the National Academy of Sciences USA 103: 3209-3213.
23) Nosil, P. 2006. Frequency-dependent selection: when being different makes you not stand out. Current Biology 16: 806-808 (Dispatch article).
22) Reimchen, T.E., and P. Nosil. 2006. Replicated ecological landscapes and the evolution of morphological diversity among Gasterosteus populations from an archipelago on the west coast of Canada. Canadian Journal of Zoology 84: 643-654.
2005
21) Nosil, P., and A. Mooers. 2005. Testing hypotheses about ecological specialization using phylogenetic trees. Evolution 59: 2256-2263.
20) Sandoval, C.P., and P. Nosil. 2005. Counteracting selective regimes and host preference evolution in ecotypes of two species of walking-sticks. Evolution 59: 2405-2413.
19) Nosil, P., and T.E. Reimchen. 2005. Ecological opportunity and levels of morphological variance within freshwater stickleback populations. Biological Journal of the Linnean Society 86: 297-308.
18) Nosil, P., T. Vines, and D.J. Funk. 2005. Perspective: Reproductive isolation caused by natural selection against immigrants from divergent habitats. Evolution 59: 705-719.
17) Rundle, H., and P. Nosil. 2005. Ecological speciation. Ecology Letters 8: 336-352.
16) Nosil, P. 2005. The role of selection and gene flow in the evolution of sexual isolation in Timema stick-insects and other Orthopteroids. Journal of Orthopteroid Research 14: 247-253.
15) Nosil, P. 2005. Darwinian speciation in the 21st century. Ecoscience 12: 434-435 (book review of Adaptive Speciation by Dieckmann, U., M. Doebeli, J.AJ. Metz, and D. Tautz).
2004
14) Nosil, P. 2004. Reproductive isolation caused by visual predation on migrants between divergent environments. Proceedings of the Royal Society of London B 271: 1521-1528.
13) Reimchen, T.E., and P. Nosil. 2004. Variable predation regimes predict the evolution of sexual dimorphism in a population of threespine stickleback. Evolution 58: 1274-1281.
12) Nosil, P., and B.J. Crespi. 2004. Does gene flow constrain trait divergence or vice-versa? A test using ecomorphology and sexual isolation in Timema cristinae walking-sticks. Evolution 58: 101-112.
2003
11) Nosil, P., B.J. Crespi, and C.P. Sandoval. 2003. Reproductive isolation driven by the combined effects of ecological adaptation and reinforcement. Proceedings of the Royal Society of London B 270: 1911-1918.
2002
10) Nosil, P., B.J. Crespi, and C.P. Sandoval. 2002. Host-plant adaptation drives the parallel evolution of reproductive isolation. Nature 417: 440-443.
9) Nosil, P. 2002. Transition rates between specialization and generalization in phytophagous insects. Evolution 56: 1701-1706.
8) Reimchen, T.E., and P. Nosil. 2002. Temporal variation in divergent selection on spine number in threespine stickleback. Evolution 56: 2472-2483.
7) Nosil, P. 2002. Food fights in house crickets, Acheta domesticus, and the effects of body size and hunger level. Canadian Journal of Zoology 80: 409-417.
2001
6) Nosil, P., and T.E. Reimchen. 2001. Tarsal asymmetry, nutritional condition and survival in water boatmen (Callicorixa vulnerata). Evolution 55: 712-720.
5) Reimchen, T.E., and P. Nosil. 2001. Ecological causes of sex-biased parasitism in three-spined stickleback. Biological Journal of the Linnean Society 73: 51-63.
4) Nosil, P. 2001. Tarsal asymmetry, trait size and extreme phenotypes in a sexually size-dimorphic water boatman (Callicorixa vulnerata). Canadian Journal of Zoology 79: 1114-1119.
3) Reimchen, T.E., and P. Nosil. 2001. Dietary differences between symmetrical and asymmetrical pelvic phenotypes in stickleback. Canadian Journal of Zoology 79: 533-539.
2) Nosil, P. 2001. Sexual size dimorphism in a natural population of Callicorixa vulnerata (Hemiptera: Corixidae). Canadian Entomologist 33: 311-313.
1) Reimchen, T.E., and P. Nosil. 2001. Lateral plate asymmetry, diet and parasitism in threespine stickleback. Journal of Evolutionary Biology 14: 632-645.
Book chapters, encyclopedia articles, and corrigendum
10) Nosil, P., C.F. L.S. Zamorano, and N. Planidin. In press. Ecological speciation and its consequences. pp. 487-493. In ‘Encyclopedia of Evolutionary Biology’ 2nd edition (C. Russo and J. Wolf, head editors, L. Knowles, section editor), Elsevier.
9) de Carvalho, C.F., and P. Nosil. 2022. Phenotypic plasticity in a gene-centric world. Book review of Phenotypic Plasticity, edited by D. Pfenning. Current Biology 32: R141–R157.
8) Nosil, P., A.A. Comeault, and T.E. Farkas. 2016. Ecological speciation and its consequences. pp. 487-493. In ‘Encyclopedia of Evolutionary Biology’ (R. Kliman, head editor, D. Ortiz-Barrientos, section editor), Elsevier.
7) Feder, J.L., S.P. Egan, and P. Nosil. 2013. Speciation and genome evolution. pp. 549-558. In ‘Princeton Guide to Evolution’ (J. Losos, chief editor, D. Schluter, subject editor), Princeton University Press.
6) Nosil, P. 2013. Reproductive isolation. pp. 173-176. In Encylopedia of Genetics, 2nd edition. (S. Maloy, K. Hughes, editors), Elsevier.
5) Safran, R.L., and P. Nosil. 2012. Speciation: the origin of new species. Nature Education Knowledge. 3: 17.
4) Nosil, P., and A. Buerkle. 2010. Population genomics. Nature Education Knowledge 1: 8.
3) Niemiller M.L, P. Nosil, and B.M. Fitzpatrick. 2010. Corrigendum: Recent divergence-with-gene-flow in Tennessee cave salamanders (Plethodontidae: Gyrinophilus) inferred from gene genealogies. Molecular Ecology 19: 1513-1514.
2) Nosil, P. 2009. Habitat preference and the formation of new species. pp. 473-477. In ‘Evolutionary Behavioral Ecology’ (C. Fox, D.F. Westneat, editors), Oxford University Press.
1) Nosil, P., and H.D. Rundle. 2009. Ecological speciation: natural selection and the formation of new species. pp. 134-142. In ‘Princeton Guide to Ecology’ (S. Levin, editor), Princeton University Press.
Nosil, P., and L. Harmon. 2009. Niche dimensionality and ecological speciation. pp. 127–154. In ‘Speciation and patterns of diversity’ (R. Butlin, J. Bridle, D. Schluter, eds.) Cambridge University Press.
Funk, D.J., and P. Nosil. 2007. Comparative analyses and ecological speciation in herbivorous insects. pp. 117-135 In ‘Specialization, Speciation, and Radiation: the Evolutionary Biology of Herbivorous Insects‘ (K. Tilmon, ed.) California University Press.
Talks and Presentations at Scientific Meetings
Assortative mating between host-associated morphs of Timema cristinae: implications for ecological speciation - UBC/SFU/UVIC Ecology and Evolution Meeting, Brackendale, B.C. (Nov. 2000).
Fitness costs of departures from symmetry: evidence from feeding ability in water boatmen and parasitism in stickleback - Les Ecologistes seminar, SFU (Jan. 2001).
Premating isolation between host-associated morphs of Timema cristinae: implications for ecological speciation - Pacific Ecology Conference, Bamfield Marine Station (Feb. 2001).
Divergent natural selection and speciation in Timema walking-sticks - Evolution conference, Knoxville, TN (Jun. 2001).
Predator-driven ecological divergence promotes premating isolation among populations of a walking-stick insect - SFU Graduate Student Symposium, SFU (Sept. 2001).
Can selection by predators promote speciation? - Les Ecologistes seminar, SFU (Oct. 2001).
Temporal variation in selection on spine number in stickleback - UBC/SFU/UVIC Ecology and Evolution Meeting, Brackendale, B.C. (Oct. 2001).
Can selection by predators promote speciation? - Ecology seminar, UBC (Nov. 2001).
Can selection by predators promote speciation? - Ecology seminar, UVIC (Nov. 2001).
Transition rates between specialization and generalization in phytophagous insects - Pacific Ecology Conference, Port Townsend, WA (Feb. 2002).
Host-plant adaptation drives the parallel evolution of reproductive isolation - Evolution conference, Urbana, IL (Jun. 2002).
Reproductive isolation driven by a balance between reinforcing selection and gene flow - Ecology seminar, UBC (Sept. 2002).
Visualizing the causes of speciation - UBC/SFU/UVIC Ecology and Evolution Meeting, Brackendale, B.C. (Nov. 2002).
Evolutionary consequences of migration during ecological speciation - Ecology seminar, SFU (Nov. 2002).
Reproductive isolation driven by the combined effects of ecological adaptation and reinforcement - Pacific Ecology Conference, Bamfield Marine Station (Feb. 2003).
Predators and phenotypic diversification within stickleback populations - Pacific Ecology Conference, Bamfield Marine Station (Feb. 2003).
Reproductive isolation driven by the combined effects of ecological adaptation and reinforcement - Evolution conference, Chico, CA (Jun. 2003).
Ecological divergence drives the evolution of premating isolation in a walking-stick insect - Ecology seminar, SFU (Oct. 2003).
Reproductive isolation caused by natural selection against migrants between divergent environments - UBC/SFU/UVIC Ecology and Evolution Meeting, Brackendale, B.C. (Nov. 2003).
Reproductive isolation driven by the combined effects of ecological adaptation and reinforcement - CalPEG conference, Irvine, CA (Dec. 2003).
Strength of selection predicts the magnitude of divergence in mating preferences during reinforcement. Evolution conference, Fort Collins, CO (Jun. 2004).
Ecological divergence drives the evolution of postmating isolation - Ecology seminar, SFU (Oct. 2004).
Habitat heterogeneity promotes the evolution of a genetic correlation between host preference and performance - UBC/SFU/UVIC Ecology and Evolution Meeting, Brackendale, B.C. (Nov. 2004).
Habitat heterogeneity promotes the evolution of a genetic correlation between host preference and performance - CalPEG conference, San Diego, CA (Dec. 2004).
Migration in heterogeneous habitats generates genetic covariance between host preference and performance - Evolution conference, Fairbanks, AK (Jun. 2005).
Outstanding questions in the ecology of speciation - Ecology seminar, SFU (Sept. 2005).
Adaptive divergence, reproductive isolation and genomic differentiation between walking-stick ecotypes - Genetics of Speciation Meeting, University of British Columbia, BC (July 2006) (poster).
Niche dimensionality and ecological speciation. Evolution conference, Christchurch, New Zealand (Jun. 2007).
Natural selection and heterogeneous genomic divergence during speciation. PopGroup Meeting, Warwick, UK (Dec. 2007).
Adaptive chromosomal divergence driven by mixed geographic mode of evolution. Evolution conference, Portland, OR (Jun. 2010) – note: presented by Jeff Feder.
Genomic architecture of speciation: islands or continents of divergence? Evolution conference, Portland, OR (June 2010).
Diffuse genetic architecture of ecological speciation revealed by 1043 genomes. Genomics in the wild conference, Selbu, Norway (June 2015).
Gene flow and the genetic architecture of speciation revealed by 1043 genomes. ESEB, Lausanne, Switzerland (August 2015).
Invited Seminars and Symposium Talks
Ecological divergence drives the evolution of reproductive isolation - Invited speaker, Population Biology Seminar Series - UC Davis (Jan. 2004).
Natural selection drives the evolution of reproductive isolation - Evolution Seminar Series - UC San Diego (Mar. 2004).
Natural selection drives the evolution of reproductive isolation - Evolution Seminar Series - UC Riverside (Apr. 2004).
Natural selection drives the evolution of reproductive isolation - Departmental Seminar Series - WWU (Oct. 2004).
Reproductive isolation driven by the combined effects of ecological adaptation and reinforcement - Invited Symposium Talk - Entomological Society of America Annual Meeting, Salt Lake City, Ut (Nov. 2004).
Natural selection drives the evolution of premating isolation - Invited Seminar - UT Austin (Jan. 2005).
Natural selection drives the evolution of premating isolation - Departmental Seminar - BYU (Apr. 2005).
Natural selection and the evolution of sexual forms of reproductive isolation - Invited Symposium Talk - Orthopterists' Society Annual Meeting, Canmore, AB (Aug. 2005).
Outstanding questions in the ecology of speciation - Departmental Seminar - Sheffield, UK (Nov. 2005).
Outstanding questions in the ecology of speciation - Departmental Seminar - University College London, UK (Nov. 2005).
Outstanding questions in the ecology of speciation - Departmental Seminar - Bern University, SWI (Nov. 2005).
Outstanding questions in the ecology of speciation - Invited Keynote Symposium Talk - Speciation symposium at the Natural History Museum - London UK (Nov. 2005).
The ecology of speciation - Population Biology Seminar - Duke University (Dec. 2005).
Outstanding questions in the ecology of speciation - Invited Keynote Symposium Talk - Graduate symposium - McGill University (Dec. 2005).
The ecology of speciation - Departmental Seminar - Vanderbilt University (Feb. 2006).
Microevolutionary processes and the formation of new species - Invited Symposium Talk, Young Scientists Symposium - University of Michigan Ann Arbor (May 2006).
Integrating experimental and comparative approaches provides unique insight into ecological speciation - American Society of Naturalists Young Investigators Symposium Talk, Evolution conference, Stony Brook, NY (June 2006).
Ernst Mayr and ecological factors in speciation – A Century of Evolution, a Symposium in honor of Ernst Mayr, London, UK (Oct. 2006).
Ecological speciation: details and generalities – Departmental Seminar – University of California Santa Barbara (March 2007).
Ecological speciation: details and generalities – Ecology Seminar – Oxford University, UK (March 2007).
Ecological speciation: details and generalities – Ecology Seminar – Zurich, SWI (March 2007).
Ecological speciation: details and generalities – Ecology Seminar – Leeds University, UK (March 2007).
Niche dimensionality and ecological speciation – Ecology and Speciation, the annual symposium of the British Ecological Society – Sheffield, UK (March 2007).
Ecological speciation: details and generalities – Departmental Seminar – Queensland University, Brisbane Australia (July 2007).
Ecological speciation: details and generalities – Departmental Seminar – Auckland University, New Zealand (July 2007).
Stages of ecological speciation in Timema walking-stick insects – Symposium Talk at the International Symposium on the Origin and Evolution of Natural Diversity, Hokkaido University, Japan (Oct. 2007).
Natural selection and the origins of biodiversity – Canadian Association for Graduate Students Annual Meeting, New Brunswick, Canada (Oct. 2007).
Stages of ecological speciation in Timema walking-stick insects – Departmental Seminar – University of Basel, Switzerland (Nov. 2007).
Two ecological explanations for (failed) speciation – Invited seminar – Biology 08 meeting, University of Lausanne, Switzerland (Feb. 2008).
Two ecological explanations for (failed) speciation – University of Oklahoma – graduate student invited speaker (Feb. 2008).
Ecological explanations for (failed) speciation – Annual Meeting for the Society for the Study of Evolution – Dobzhansky prize talk – University of Minnesota (June 2008).
Ecological explanations for (incomplete) speciation – Potsdam University, Germany (Nov. 2008).
Strong versus multifarious selection in the origin of species – Museum of Natural History, Berlin (Nov. 2008).
Strong versus multifarious selection in the origin of species – University of Bern (Dec. 2008).
Divergent selection and heterogeneous genomic divergence – EAWAG, Lucerne (Dec. 2008).
Natural selection and the (incomplete) formation of new species – Wissenschaftskolleg, Berlin (Jan. 2009).
Ecological explanations for (incomplete) speciation – University of Texas, Austin (Apr. 2009).
Natural selection and the (incomplete) formation of new species – University of Colorado, Boulder (Nov. 2009).
Natural selection and the (incomplete) formation of new species – American Museum of Natural History, New York (Jan. 2010).
Natural selection and the (incomplete) formation of new species – University of Wyoming (Feb. 2010).
Natural selection and (incomplete) speciation – University of Toronto, Annual Graduate Student Symposium (Apr. 2010).
Genomic architecture of speciation: theory and data from herbivorous insects. ERC funded workshop on Frontiers in Speciation Research (FROSpects). Holar, Iceland (Aug. 2010).
Phenotypic and genomic tests of two hypotheses for species formation – University of Lausanne (Nov. 2010).
Phenotypic and genomic tests of two hypotheses for species formation – University of Missouri (Feb. 2011).
Phenotypic and genomic tests of two hypotheses for species formation – University of Denver (Feb. 2011).
Phenotypic and genomic tests of two hypotheses for species formation – University of Michigan at Ann Arbor – Graduate Student Invited Speaker (Feb. 2011).
Genomic architecture of ecological speciation – Harvard University – OEB seminar (March 2011).
Genomic architecture of ecological speciation – McGill University (April 2011).
Genomic architecture of ecological speciation – Kastanienbaum, Switzerland (May 2011).
The ecological and genomic basis of species formation – Goettingen, Germany (June 2011).
Genomic consequences of multiple speciation processes. I. Data – University of Idaho (October 2011).
Genomic consequences of multiple speciation processes. II. Theory – University of Idaho (October 2011).
Genomic consequences of multiple speciation processes – University of Lausanne (Nov. 2011).
Two strategies for conducting biological research – University of Neuchâtel Graduate Student Conference (Nov. 2011).
Phases of genomic divergence during speciation – ITN training network Finland (Feb. 2012).
Phases of genomic divergence during speciation – Genetics of speciation workshop, Uppsala (Mar. 2012).
Genomic divergence during speciation – University of Chicago (Apr. 2012).
Genome evolution and speciation: symposium summary – SSE sponsored symposium at the 1st joint SSE/ESEB congress, Ottawa (July 2012).
Phenotypic and genomic change in field experiments – ASN sponsored symposium, 1st joint SSE/ESEB congress, Ottawa (July 2012).
Phenotypic and genomic change in field experiments – Royal Entomological Society Meeting, Cambridge UK (July 2012).
Contributions of stickleback to understanding of ecology and evolution – Stickleback meetings, Bainbridge Island, WA (August 2012).
Eco-evolutionary dynamics: from genomes to communities – National Croatian Biology Congress, Sibenik (September 2012).
Ecological and evolutionary consequences of gene flow – University of Sheffield, UK (October 2012).
Ecological and evolutionary consequences of gene flow – Zoological Station, Naples, Italy (November 2012).
Rapid genome evolution during founder events – University of Helsinki, Finland (February 2013).
Natural selection, founder events, and rapid genome evolution in a field experiment – Michigan State University, Michigan (April 2013).
Genomic basis of speciation with gene flow – Speciation 2013, Montpellier, France (May 2013).
Genomic divergence: moving from pattern to process – Genomic Islands symposium - ESEB 2013, Lisbon, Portugal (August 2013).
Genomic divergence: moving from pattern to process – Departmental Seminar, Lund University, Sweden (September 2013).
Genomic divergence: moving from pattern to process – Departmental Seminar, University of Nottingham, UK (November 2013).
Eco-evolutionary dynamics: from genes to communities – Departmental Seminar, University of Victoria, Canada (December 2013).
Micro-geographic adaptation: a genomic perspective – American Society of Naturalists – Monterey, USA (January 2014).
The ecological consequences of rapid evolution – Natural History Society – Sheffield, UK (February 2014).
Stick insect genomes reveal natural selection’s role in parallel speciation – Departmental Seminar, University of Glasgow (February 2014).
Stick insect genomes reveal natural selection’s role in parallel speciation – EGI Seminar, University of Oxford (March 2014).
Stick insect genomes reveal natural selection’s role in parallel speciation – MVZ seminar, University of California, Berkeley (April 2014).
Natural selection both drives and constrains repeated speciation – CSEE meeting, Genomes to Biomes Symposium, McGill, Montreal (May 2014).
Eco-evolutionary dynamics in a plant-insect interaction – UK Plant Evolution meeting – Edinburgh (September 2014).
Natural selection both drives and constrains repeated speciation – IBED seminar, University of Amsterdam, Netherlands (September 2014).
Natural selection both drives and constrains repeated speciation – MEGP meeting, University of Vigo, Spain (October 2014).
Natural selection both drives and constrains repeated speciation – WEEN meeting, Gregynog, Wales (October 2014).
Genomic architecture and the dynamics of speciation – Departmental seminar, University of Liverpool (November 2014).
Genomic architecture and the dynamics of speciation – Departmental seminar, Vienna Institute for Population Genetics, Austria (December 2014).
Natural selection both drives and constrains repeated speciation – Departmental seminar, University of Southampton (February 2015).
Genomic divergence when speciation repeats itself – 62ND annual meeting of the Ecological Society of Japan, Kagoshima (March 2015).
Eco-evolutionary dynamics in the chaparral – Autobahn Society public lecture, Santa Barbara, California (April 2015).
Selection, gene flow, and genomic islands of differentiation – SMBE satellite meeting, France (May 2015).
Ecological genomics revealed relaxed and difficult aspects of speciation – 12th Croatian Biology Congress, Sveti Martin, Croatia (September 2015).
Major and minor genes in ecological speciation – Departmental Seminar, Institute for Botany, ETH, Zurich, Switzerland (October 2015).
Gradual and punctuated speciation reconciled – Departmental Seminar, Queen Mary University, London (December 2015).
Gradual and punctuated speciation reconciled – Departmental Seminar, University College London (December 2015).
Speciation dynamics across an evolutionary gap – Biodiversity Seminar, St. Andrews University (March 2016).
Evolutionary dynamics support a genomic view of speciation – Biodiversity Seminar, University of British Columbia (April 2016).
Evolutionary dynamics support a genomic view of speciation – Ecology Seminar, University of Victoria (April 2016).
Evolutionary dynamics support a genomic view of speciation – Integrative Biology Seminar, Simon Fraser University (April 2016).
Eco-evolutionary dynamics in an arthropod community – Conference on the genomics of eco-evolutionary dynamics, Ascona, Switzerland (June 2016).
Eco-evolutionary dynamics in an arthropod community –Seminar, University of Leuven, Belgium (June 2016).
Dynamics of speciation: gradualism and tipping points –Seminar, University of Wageningen, Netherlands (June 2016).
Tipping points in eco-evolutionary dynamics – Departmental Seminar, CEFE, Montpellier, France (October 2016).
Eco-evolutionary dynamics in the wild – Departmental Seminar, University of Manchester, UK (December 2016).
Ilkka Hanski’s contributions to the study of eco-evolutionary dynamics – Invited Symposium Talk – British Ecology Society Meeting, Liverpool, UK (December 2016).
Transitions between phases of genomic differentiation during speciation – Departmental Seminar, Department of Evolutionary Biology, University of Uppsala, Sweden (January 2017).
Genomic insights into the dynamics of speciation – Gordon Research Conference on Speciation, Barga, Italy (February 2017).
Predictability of evolutionary dynamics – Annual Meeting of the Canadian Society for the Study of Ecology and Evolution, Victoria, BC, Canada (May 2017).
Eco-evolutionary dynamics in Californian arthropod communities – Departmental Seminar – Utah State University, Logan, Utah, USA (October 2017).
Ecological discontinuity drives multi-genic adaptation in cryptic coloration – NAITO foundation conference, Hokkaido, Japan (October 2018).
Ecological discontinuity drives multi-genic adaptation in cryptic coloration – Population ecology conference, Tokyo, Japan (October 2018).
Genetic interactions and evolution: second-order effects or of the essence? – Departmental Seminar – Stockholm University, Sweden (October 2019).
The causes of epistasis in a genotype-phenotype-fitness map – Departmental Seminar – University of Bern, Switzerland (October 2019).
The causes of epistasis in a genotype-phenotype-fitness map – Departmental Seminar – University of Lausanne, Switzerland (October 2019).
The causes of epistasis in a genotype-phenotype-fitness map – Departmental Seminar – CEFE, France (December 2019).
Genomics insights into biological processes – Departmental Seminar – University of Victoria, Victoria, Canada (January 2020).
Prediction Evolution – Workshop on Population and Speciation Genomics – Cesky Krumlov, Czech Republic (January 2020).
Prediction Evolution – Departmental Seminar – Frei Univeristat – Berlin, January (January 2020).
Predicting change in complex eco-evolutionary systems - Departmental Seminar - University of Maryland, USA (September 2022).
Adaptive landscapes shape the repeatability of evolution - Departmental Seminar - Moulis (October 2024).
Adaptive landscapes shape the repeatability of evolution - Tulip Forum - Toulouse (November 2024).
Teaching Experience
i) Colorado – lectures and practical labs at the undergraduate and graduate level.
Evolution (110 undergraduate students in a series of over 40 lectures and a dozen practical labs per year), fall 2009, 2010, 2011
Advanced Topics in Evolutionary Biology (Speciation, 15 graduate students), fall 2009
Evolutionary Genetics (24 students, mix of undergraduates and graduates with both lecture and practical components), fall 2011
Guest undergraduate lectures on general topics in ecology and evolution at UCSB, SFU, and the Bamfield Marine Station
ii) Sheffield – I was awarded time off from lecturing by the department to focus on my ERC project but did engage in undergraduate teaching via project supervision.
Supervision of 4th year undergraduate research projects in 2013, 2014, and 2016.
iii) Additional teaching and supervisory experience (2006-present).
Training of >25 undergraduates in final year projects or summer internships. Hosting of visiting researchers from the undergraduate to the post-doctoral level.
iv) details of advising
I have advised eight Post-doctoral fellows in the past, and co-advised three others. I am currently advising three Post-doctoral fellows.
2009-2012. Moritz Muschick. ‘Host-plant shifts during the adaptive radiation of Timema stick insects’.
2009-2014. Victor Soria-Corrasco, ‘Genomic changes during parallel speciation in stick insects’.
2011-2014. Kei Matsubayashi. ‘Hybrid speciation in Japanese ladybird beetles’. 2012-2015. Rudiger Riesch. ‘Chemical communication and speciation in Timema stick
insects’.
2012-2015. Stu Dennis. ‘Population genomics of blue mussel populations along the Adriatic
coast’.
2013.-2016. Dorotea Lindtke. ‘Balancing selection on chromosomal forms of a stick insect’. 2013-2016. Kay Lucek. ‘Structural variation and adaptation in stick insects’.
2014-2017. Marisol de la Morial Curiel. ‘Ecology and genetics of a Mexican stick insect’. polymorphism’.
2012-2015. Maja Strut. Co-advised. ‘Eco-toxicology of mussel populations along the Adriatic
coast’.
2014-2019. Jil Olofsson. Co-advised. ‘Population genomics of lateral gene transfers in
grasses’.
2014-2019. Luke Dunning. Co-advised. ‘Comparative genomics of lateral gene transfers in grasses’.
2020-2022. Venera Tyukmaeva. ‘Functional genetics of color polymorphism in stick
insects’.
Current - Vanina Tonzo, Romain Villoutreix, Marion Sinclair-Waters.
PhD students
I have advised three PhD students to graduation and co-advised one other. I currently have two Phd students.
2010-2014. Timothy Farkas. ‘Eco-evolutionary dynamics in an insect community’. 2010-2015. Aaron Comeault. ‘Maintenance of polymorphism in Timema stick insects’. 2014-2018. Clarissa de Carvalho. ‘Coupling of genetic and epigenetic variation during local
adaptation’.
2014-2018. Dorotea Grbn. co-advised. ‘Physiological and evolutionary response of mussels to
a pollution gradient’.
2019-present. Laura Zamorano. ‘The dynamics of eco-evolutionary systems’.
2021-present. Nick Planidin. ‘Epigenetics and local adaptation’.
Masters students
I have advised six Masters students to graduation.
2009-2010. Mat Sommers. ‘Transcriptome characterization and gene flow in stick insects’.
2012-2013. Emma Curran. ‘Genome wide association mapping of color in stick insects’.
2013-2014. Markus Smith. ‘Morphometrics of shell shape in blue mussels’.
2014-2015. Freddie Whiting ‘Geographic clines in stick insects from two mountains’. 2020. Isra Campo. ‘Genomics of stick insects along an altitudinal gradient’.
2021. Maidie Sinitambirivoutin. ‘Early-warning signals of impending speciation’.
Other training
I have hosted seven undergraduate students, four technicians, and seven visiting researchers.
Diversity Statement
My lab group emphasizes diversity, and promotes equal opportunities for all qualified researchers regardless of gender, national or ethnic background. Specifically, many members of my group have been, and currently are, female. Moreover, group members stem from diverse backgrounds and nationalities, across Europe, North and South America, and Asia.
Services to the Scientific Community
Review of 182 Manuscripts for 34 different peer-reviewed journals including Nature (17), Science (11), Nature Ecology and Evolution (5), Ecology Letters (1), Evolution (43), American Naturalist (8), Proceedings of the National Academy of Sciences USA (8), Journal of Evolutionary Biology (5), Proceedings of the Royal Society of London B (6), Systematic Biology (1), Philosophical Transactions of the Royal Society of London B (3), Behavioural Ecology (3), Behavioral Ecology and Sociobiology (1), Ecological Entomology (1), Journal of Animal Ecology (1), Biology Letters (1), Heredity (5), Functional Ecology (1), Journal of Heredity (1), Biology Direct (2), Plant Ecology and Diversity (1), International Journal of Parasitology (1), International Journal of Ecology (3), Biotropica (1), Evolutionary Ecology Research (1), Molecular Ecology (13), Biological Journal of the Linnean Society (4), BMC Evolutionary Biology (1), Evolutionary Ecology (1), Public Library of Science Biology (12), Public Library of Science One (1), Public Library of Science Genetics (2), Molecular Biology and Evolution (3), Trends in Ecology and Evolution (11), Current Biology (10)
Associate Editor, Proceedings of the Royal Society of London B (2015-2020)
Guest Editor for Evolution, PLoS Biology, Philosophical Transactions of the Royal Society of London B
Faculty member of Faculty of 1000 (F1000)
Review of 3-year research proposal for National Science Foundation (3 proposals), 5-year research CAREER grant proposal for National Science Foundation, 5-year European Research Council Advanced Grant (4 proposals), 5-year European Research Council Starter Grant (3 proposals), 3-year Mardsen Fund proposal, Graduate Women in Science Fellowship application for the National Science Foundation, 3-year National Environmental Research Council grant proposal (UK), 3-year Swiss National Science Foundation research grant, 3-year Croatian Science Foundation research grant (2 proposals)
Co-chair (with Rutger Vos), organizing committee for the 24th Annual Pacific Ecology and Evolution Conference (2003)
Co-organizer (with Dr. Steve Vamosi) of Symposium on ‘Predation and Evolution Diversification’ held at the 11th congress of the European Society for Evolutionary Biology, August 2007
Co-organizer (with Dr.’s Axel Meyer, Jim Mallet, and Jeff Feder) of Symposium on ‘Genetics of adaptation and speciation’ held at the Institute for Advanced Study, Wissenschaftskolleg, Berlin, March 2009
Co-organizer (with Dr. Jeff Feder) of SSE-sponsored (Society for the Study of Evolution) Symposium on ‘Genome Evolution and Speciation’ held at the first joint congress of the SSE and European Society for Evolutionary Biology, Ottawa, Canada, July 2012
Co-advisor, evaluation of Centre for Excellence in Eco-evolutionary dynamics, Leuven, Belgium, June 2016
External advisor for a job search on speciation genomics, University of Uppsala, Sweden (November 2016), and for a W3 professorship at the University of Goettingen, Germany (March 2017).
Ph.D. Thesis examiner. External. Xavier Thibert-Plante (McGill University), Moritz Muschick (University of Basel), Loren Sackett (University of Colorado, Boulder), Lucie Queste (York), Peter Moran (St. Andrews); plus one internal examiner role.
Member of the Society for the Study of Evolution, the American Society of Naturalists, the European Society for Evolutionary Biology, and the Canadian Society for Ecology and Evolution
Collaborations
I have collaborated extensively at the national and international level. Thus, over the last decade I have established a robust collaborative network that regularly publishes together, with the complementary expertise of network members rendering the research more than the sum-of-its-parts. Since arrival in France, I have initiated new collaborations at the national and CEFE level. Details are as follows.
International collaborators
Zach Gompert (Utah State University; Computational and statistical genomics), Tom Parchman (University of Reno, Nevada; Computational and statistical genomics, molecular biology), Jeff Feder (University of Notre Dame; Speciation in the wild, theory), Sam Flaxman (University of Colorado, Boulder; Theoretical models of evolution), Tom Reimchen (University of Victoria; Natural selection in the wild, ecological genetics), Bernie Crespi (Simon Fraser University, Speciation and adaptation in the wild), Cris Sandoval (University of California, Santa Barbara; Ecology of Californian insect communities), Gerhard Gries (Simon Fraser University; chemical communication).
French National collaborators
Jose Montoya (Moulis experimental station; Experimental eco-evolutionary dynamics), Sonia Kefi (University of Montpellier; Theoretical models and analysis of eco-evolutionary dynamics), Vasilis Dakos (University of Paris; Theoretical models and analysis of eco- evolutionary dynamics).
CEFE and SETE collaborators
Mathieu Joron (Evolutionary genetics, adaptation, speciation), Luis-Miguel Chevin (Theoretical models of evolution), Pierre-Andre Chrochet (Invasion biology), Jose-Montoya (Eco-evolutionary dynamics), Alexis Chaine (Predator learning and evolution).
Referees for Patrik Nosil
Dr. B.J. Crespi
Department of Biosciences, Simon Fraser University
8888 University Drive, Burnaby, B.C. V5A 1S9
Phone: 604 291-3533
Fax: 604 291-3496
email: crespi@sfu.ca
Dr. Dolph Schluter
Department of Zoology, University of British Columbia
Vancouver, B.C. Canada
Phone: 604 822-2387
Fax: 604 822-2416
email: schluter@zoology.ubc.ca
Dr. Arne Mooers
Department of Biosciences, Simon Fraser University
8888 University Drive, Burnaby, B.C. V5A 1S9
Phone: 604 291-4649
Fax: 604 291-3496
email: amooers@sfu.ca
PUBLICATIONS
Nosil P, de Carvalho CF, Villoutreix R, Zamorano LS, Sinclair-Waters M, Planidin NP, Parchman TL, Feder J, Gompert Z.
(2024) - Evolution repeats itself in replicate long-term studies in the wild - Science Advances May 24;10(21):eadl3149